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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902293.1_cds_XP_016452305.1_46556
CDS Infomation

[gene=LOC107776874] [db_xref=GeneID:107776874] [protein=transcription factor bHLH48-like isoform X2] [protein_id=XP_016452305.1] [location=join(34052..34516,34927..35049,35160..35225,37897..37965,38338..38409,39181..39388,39481..39518)] [gbkey=CDS]
Sequence

ATGGAGTCAACCCAAGTTAGATCCGCAAGTTGCGGAGGCAAAGCAGGAGAAACGGCAACC
GGGTTTCATCATATTTGCGGTGAAGGCCAGAGCATAATAATGCCAGTACCAACGGAAGCT
GCTGGAAATTCTTTTACTGCTTTACTTGAACTGCCACCAAATCAAGCTTTGGACCTTTTA
GTACATTCTGACGAAATGGGTTCAGCTGAACTTTCCCTACCAGATAATCACAACAAGCCC
TACTACTCTTCTCCTCTAATTGACGGAGGGTCCGCCGGAGAATTCGCCGGAGAGTTCTCA
GTCTTCGCCGCCGGAAATTCGCCGGAGAATAGCTCATTTCCGTCCAATTCACAATTCGTG
AAGCAAGAACCAGTTGATTCTGATTCCAATCCTAATTCCTCTCCCGAGTTTTCAAATCCA
ACTGTTGATCAGAAAACCACAAAGCGAAAAGAACGCCAGAAAAAGGGGAAAGAAAGCAGT
AGCAAAAAGAGCAAAAGATCGGCAAATGATACCTCAGAGAAGCTTCCGTATGTTCATGTC
CGAGCAGCTAGGGGGCAAGCAACAGATAGCCATAGTTTAGCTGAAAGAGCAAGGAGAGAG
AAGATTAATGCAAGAATGAAGCTATTACAGGAATTGGTCCCGGGATGTAACAAGATTTCA
GGTACTGCGATGGTGCTGGATGAGATCATTAACCATGTACAATCCCTACAGCGTCAAGTG
GAGTTCTTATCAATGAGACTTGCTGCAGTAAACCCAAGAGTAGATTTCAACCTTGATAGT
CTCTTTGCTACAGAAAGTGGTTCTGCAGTGGATAGTAACTTCGCGAGCATAGTTGCGCCT
TCGATTTGGCCTGAAGGACAAACCAGCGGGAATAGAAATCAGTATCAACAGCTGTTGCAA
ATTGATGGATTCAATCAGCCTGTCTGGGTTAGGGAAGAAGATAATTCTAGCTTCATTACT
CCAGAGAACTCATTTTTGACTTATGATTCCTCTGCAAATTCAGCTTCTTTGCACCAAAAT
CAGCTGAAAATGGAGCTATGA

Peptide Sequence

PEP ID

XP_016452305.1
PEP Infomation

PREDICTED: transcription factor bHLH48-like isoform X2 [Nicotiana tabacum]
Sequence

MESTQVRSASCGGKAGETATGFHHICGEGQSIIMPVPTEAAGNSFTALLELPPNQALDLL
VHSDEMGSAELSLPDNHNKPYYSSPLIDGGSAGEFAGEFSVFAAGNSPENSSFPSNSQFV
KQEPVDSDSNPNSSPEFSNPTVDQKTTKRKERQKKGKESSSKKSKRSANDTSEKLPYVHV
RAARGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTAMVLDEIINHVQSLQRQV
EFLSMRLAAVNPRVDFNLDSLFATESGSAVDSNFASIVAPSIWPEGQTSGNRNQYQQLLQ
IDGFNQPVWVREEDNSSFITPENSFLTYDSSANSASLHQNQLKMEL

Transcript Sequence

Gene sequence data has not been registered.